BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G11LP1|AL428966
(814 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1746 1453 0.0
>3x_Contig1746
Length = 26672
Score = 1453 bits (714), Expect = 0.0
Identities = 764/800 (95%), Gaps = 1/800 (0%)
Strand = Plus / Minus
Query: 1 aggaccatatttcataatgaatwatactttttcaaacggtgaatgataatgttcttgcct 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10531 aggaccatatttcataatgaataatactttttcaaacggtgaatgataatgttcttgcct 10472
Query: 61 cgttggtgttacatgattcaacttcaactcgacaaccaaggacgtgatgaccataatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10471 cgttggtgttacatgattcaacttcaactcgacaaccaaggacgtgatgaccataatgac 10412
Query: 121 acccacgccgctgatgaatccccttaacaatgccctactcawaacattttccaagawacc 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 10411 acccacgccgctgatgaatccccttaacaatgccctactcaaaacattttccaagaaacc 10352
Query: 181 taatctcaacaatccaccagtaagtaaaactwaaccggagataaawgtwatgaccaaaca 240
||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 10351 taatctcaacaatccaccagtaagtaaaactaaaccggagataaaagtaatgaccaaaca 10292
Query: 241 aatgttaattgccttcagttttgggtcctctgaaagtcttgcttcaattgcttgccccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10291 aatgttaattgccttcagttttgggtcctctgaaagtcttgcttcaattgcttgccccaa 10232
Query: 301 aatyaacgaaatagcactctctggccctacaatcatttgaggaacagacccaagawctgt 360
||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 10231 aatcaacgaaatagcactctctggcc-tacaatcatttgaggaacagacccaagaactgt 10173
Query: 361 gtaaaccgctggagagaataccagakagtatwayccgcataatggagggacatgcgctac 420
||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||
Sbjct: 10172 gtaaaccgctggagagaataccagagagtataacccgcataatggagggacatgcgctac 10113
Query: 421 tgacgttgcataggacattkctaacggaattttawaakatgctaaakataaacctgcgat 480
||||||||||||||||||| |||||||||||| | || |||||||| |||||||||||||
Sbjct: 10112 tgacgttgcataggacattgctaacggaatttgaaaagatgctaaagataaacctgcgat 10053
Query: 481 gaaatcacccatacatttyttcacagaataakttggwatccatgakawacagggcaaatw 540
|||||||||||||||||| |||||||||||| |||| |||||||| | |||||||||||
Sbjct: 10052 gaaatcacccatacatttcttcacagaataagttggaatccatgagaaacagggcaaata 9993
Query: 541 gtaaggkatcktwtccttcawagtwacgcgttcattttcggggaaacttacggtgctaaa 600
|||||| ||| | ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 9992 gtaagggatcgtatccttcaaagtaacgcgttcattttcggggaaacttacggtgctaaa 9933
Query: 601 tttcaaccccacagtactagtgcttgttctctgtacatcatttatwkatgtatctgcwcc 660
||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||
Sbjct: 9932 tttcaaccccacagtactagtgcttgtactctgtacatcattaaaagatgtatctgcacc 9873
Query: 661 tatgcaggagccagtaccatactttttgctcggagaggtatcggtaggagtccctttttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9872 tatgcaggagccagtaccatactttttgctcggagaggtatcggtaggagtccctttttt 9813
Query: 721 wtcgagcaaaacagcattcaggtcttgawaagccattgttacaacatgtaggagctgata 780
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 9812 atcgagcaaaacagcattcaggtcttgaaaagccattgttacaacatgtaggagctgata 9753
Query: 781 gcggaaagataacggtacga 800
||||||||||||||||||||
Sbjct: 9752 gcggaaagataacggtacga 9733
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3372
Number of Sequences: 1807
Number of extensions: 3372
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 814
length of database: 10,358,551
effective HSP length: 16
effective length of query: 798
effective length of database: 10,329,639
effective search space: 8243051922
effective search space used: 8243051922
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.2 bits)